Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine acetyltransferase | BK664_18700 | Not Available | Negative | 4082021 - 4082947 | 33443.0 |
| d-cysteine desulfhydrase | BK664_18705 | Not Available | Positive | 4083141 - 4084133 | 35085.2 |
| cystine abc transporter substrate-binding protein | BK664_18710 | Not Available | Positive | 4084412 - 4085212 | 28788.7 |
| amino acid abc transporter permease | BK664_18715 | Not Available | Positive | 4085212 - 4085877 | 24540.5 |
| l-cystine abc transporter atp-binding protein yecc | BK664_18720 | Not Available | Positive | 4085882 - 4086637 | 27768.9 |
| hypothetical protein | BK664_18725 | Not Available | Positive | 4087140 - 4087904 | 28113.9 |
| sfnb family sulfur acquisition oxidoreductase | BK664_18730 | Not Available | Positive | 4088160 - 4089401 | 44788.4 |
| sfnb family sulfur acquisition oxidoreductase | BK664_18735 | Not Available | Positive | 4089425 - 4090630 | 43829.6 |
| n5,n10-methylene tetrahydromethanopterin reductase | BK664_18740 | Not Available | Positive | 4090630 - 4091988 | 50843.9 |
| methionine abc transporter substrate-binding protein | BK664_18745 | Not Available | Positive | 4092118 - 4092927 | 29067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
