Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter substrate-binding protein | BK664_18650 | Not Available | Positive | 4072127 - 4073104 | 34494.5 |
| taurine transporter atp-binding subunit | BK664_18655 | Not Available | Positive | 4073120 - 4073914 | 28871.9 |
| taurine abc transporter permease | BK664_18660 | Not Available | Positive | 4073911 - 4074744 | 29601.3 |
| taurine dioxygenase | BK664_18665 | Not Available | Positive | 4074795 - 4075637 | 31704.8 |
| l-glyceraldehyde 3-phosphate reductase | BK664_18670 | Not Available | Negative | 4075769 - 4076806 | 38051.1 |
| hypothetical protein | BK664_18675 | Not Available | Negative | 4076927 - 4077328 | 14564.1 |
| lysr family transcriptional regulator | BK664_18680 | Not Available | Negative | 4077432 - 4078322 | 33200.2 |
| 3-ketoacyl-acp reductase | BK664_18685 | Not Available | Positive | 4078459 - 4079199 | 26197.5 |
| hypothetical protein | BK664_18690 | Not Available | Positive | 4079351 - 4079611 | 9105.59 |
| choline transporter | BK664_18695 | Not Available | Negative | 4079639 - 4081633 | 73359.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
