Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | BK664_18500 | Not Available | Positive | 4040471 - 4041862 | 50503.8 |
| thioesterase | BK664_18505 | Not Available | Positive | 4041903 - 4042358 | 17127.7 |
| 3'(2'),5'-bisphosphate nucleotidase | BK664_18510 | Not Available | Negative | 4042487 - 4043314 | 29410.1 |
| adp compounds hydrolase nude | BK664_18515 | Not Available | Negative | 4043311 - 4043877 | 20790.9 |
| haloacid dehalogenase | BK664_18520 | Not Available | Positive | 4043967 - 4044629 | 25186.2 |
| peptidoglycan-binding protein lysm | BK664_18525 | Not Available | Negative | 4044757 - 4045197 | 15572.7 |
| lysr family transcriptional regulator | BK664_18530 | Not Available | Positive | 4045334 - 4046221 | 32859.7 |
| formate dehydrogenase family accessory protein fdhd | BK664_18535 | Not Available | Positive | 4046316 - 4047155 | 29665.6 |
| cbbbc protein | BK664_18540 | Not Available | Positive | 4047152 - 4049500 | 86295.5 |
| hypothetical protein | BK664_18545 | Not Available | Positive | 4049826 - 4050314 | 15763.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
