Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrp-dependent type iii effector protein | BK664_18450 | Not Available | Negative | 4027098 - 4028378 | 45298.1 |
| 2-keto-3-deoxygluconate permease | BK664_18455 | Not Available | Negative | 4028375 - 4029388 | 34688.5 |
| hypothetical protein | BK664_18460 | Not Available | Negative | 4029685 - 4030968 | 46531.9 |
| protein-disulfide isomerase | BK664_18465 | Not Available | Negative | 4031220 - 4031891 | 24140.8 |
| hypothetical protein | BK664_18470 | Not Available | Negative | 4032152 - 4032364 | 7992.53 |
| agmatine deiminase | BK664_18475 | Not Available | Negative | 4032610 - 4033716 | 40565.8 |
| n-carbamoylputrescine amidase | BK664_18480 | Not Available | Negative | 4033722 - 4034600 | 32809.6 |
| hypothetical protein | BK664_18485 | Not Available | Negative | 4034904 - 4037816 | 105721.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK664_18490 | Not Available | Positive | 4038014 - 4038559 | 20489.0 |
| sensor histidine kinase | BK664_18495 | Not Available | Positive | 4038666 - 4040474 | 66638.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
