Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_18350 | Not Available | Positive | 4010976 - 4011428 | 16825.9 |
| gaba permease | BK664_18355 | Not Available | Negative | 4011501 - 4012892 | 49628.9 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK664_18360 | Not Available | Positive | 4013446 - 4014219 | 28187.2 |
| amino acid abc transporter | BK664_18365 | Not Available | Positive | 4014233 - 4014979 | 27567.6 |
| abc transporter permease | BK664_18370 | Not Available | Positive | 4015058 - 4015750 | 24920.6 |
| abc transporter permease | BK664_18375 | Not Available | Positive | 4015750 - 4016439 | 25819.3 |
| sam-dependent methyltransferase | BK664_18380 | Not Available | Positive | 4016420 - 4017649 | 45685.8 |
| cytosine deaminase | BK664_18385 | Not Available | Positive | 4017950 - 4019191 | 44024.9 |
| Trna-thr | Not Available | Not Available | Positive | 4019311 - 4019386 | Not Available |
| short-chain dehydrogenase/reductase | BK664_18395 | Not Available | Negative | 4019465 - 4020307 | 30291.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
