Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s41 | BK664_18250 | Not Available | Positive | 3992029 - 3993348 | 46372.8 |
| hypothetical protein | BK664_18255 | Not Available | Positive | 3993350 - 3994141 | 28803.2 |
| hypothetical protein | BK664_18260 | Not Available | Positive | 3994318 - 3995826 | 55656.9 |
| hypothetical protein | BK664_18265 | Not Available | Positive | 3995915 - 3997363 | 53145.4 |
| amino acid abc transporter substrate-binding protein | BK664_18270 | Not Available | Negative | 3997344 - 3998099 | 28072.2 |
| imidazole glycerol phosphate synthase subunit hisf | BK664_18275 | Not Available | Negative | 3998173 - 3998943 | 27269.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BK664_18280 | Not Available | Negative | 3998953 - 3999690 | 25747.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | BK664_18285 | Not Available | Negative | 3999733 - 3999990 | 10109.0 |
| imidazole glycerol phosphate synthase subunit hish | BK664_18290 | Not Available | Negative | 3999991 - 4000629 | 23323.7 |
| imidazoleglycerol-phosphate dehydratase | BK664_18295 | Not Available | Negative | 4000629 - 4001222 | 21863.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
