Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | BK664_18200 | Not Available | Positive | 3982613 - 3983233 | 22797.5 |
| pas domain-containing sensor histidine kinase | BK664_18205 | Not Available | Positive | 3983464 - 3984549 | 40098.7 |
| nitrogen regulation protein nr(i) | BK664_18210 | Not Available | Positive | 3984546 - 3985982 | 53059.4 |
| hypothetical protein | BK664_18215 | Not Available | Negative | 3986529 - 3986969 | 16181.3 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | BK664_18220 | Not Available | Positive | 3986968 - 3987423 | 16919.3 |
| protein-export chaperone secb | BK664_18225 | Not Available | Negative | 3987590 - 3988075 | 17839.1 |
| glutaredoxin 3 | BK664_18230 | Not Available | Negative | 3988117 - 3988371 | 9156.06 |
| sulfurtransferase | BK664_18235 | Not Available | Negative | 3988373 - 3988786 | 14489.8 |
| phosphoglycerate mutase (2,3-diphosphoglycerate-independent) | BK664_18240 | Not Available | Positive | 3988940 - 3990469 | 55002.3 |
| peptidase m23 | BK664_18245 | Not Available | Positive | 3990699 - 3991997 | 47860.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
