Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_18100 | Not Available | Negative | 3954631 - 3955482 | 30754.8 |
| histidine abc transporter substrate-binding protein | BK664_18105 | Not Available | Negative | 3955553 - 3956521 | 35265.5 |
| cytosine permease | BK664_18110 | Not Available | Negative | 3956591 - 3958063 | 52030.2 |
| urocanate hydratase | BK664_18115 | Not Available | Negative | 3958211 - 3959899 | 61393.1 |
| hypothetical protein | BK664_18120 | Not Available | Negative | 3960380 - 3960949 | 20479.3 |
| histidine utilization repressor | BK664_18125 | Not Available | Negative | 3960946 - 3961695 | 27885.5 |
| formimidoylglutamate deiminase | BK664_18130 | Not Available | Positive | 3961803 - 3963167 | 49683.7 |
| lipocalin | BK664_18135 | Not Available | Negative | 3963296 - 3963865 | 21478.8 |
| hypothetical protein | BK664_18140 | Not Available | Negative | 3963897 - 3964151 | 8885.84 |
| chemotaxis protein | BK664_18145 | Not Available | Positive | 3964449 - 3966329 | 66849.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
