Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii poly(r)-hydroxyalkanoic acid synthase | BK664_17950 | Not Available | Positive | 3922687 - 3924369 | 62882.0 |
| tetr family transcriptional regulator | BK664_17955 | Not Available | Positive | 3924429 - 3925049 | 23544.0 |
| poly(3-hydroxyalkanoate) granule-associated protein phaf | BK664_17960 | Not Available | Negative | 3925241 - 3926071 | 27577.2 |
| poly(3-hydroxyalkanoate) granule-associated protein phai | BK664_17965 | Not Available | Negative | 3926082 - 3926504 | 15309.5 |
| polyhydroxyalkanoic acid system protein | BK664_17970 | Not Available | Negative | 3926756 - 3927031 | 9786.83 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | BK664_17975 | Not Available | Positive | 3927187 - 3927957 | 28403.4 |
| scp2 domain-containing protein | BK664_17980 | Not Available | Positive | 3927957 - 3928580 | 22875.4 |
| ubiquinone biosynthesis regulatory protein kinase ubib | BK664_17985 | Not Available | Positive | 3928577 - 3930181 | 61560.2 |
| phosphoribosyl-amp cyclohydrolase | BK664_17990 | Not Available | Positive | 3930272 - 3930673 | 15294.2 |
| phosphoribosyl-atp diphosphatase | BK664_17995 | Not Available | Positive | 3930666 - 3930998 | 11933.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
