Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein | BK664_17850 | Not Available | Negative | 3898113 - 3899711 | 55302.0 |
| 3-dehydroquinate synthase | BK664_17855 | Not Available | Negative | 3899722 - 3900822 | 39933.3 |
| shikimate kinase | BK664_17860 | Not Available | Negative | 3900974 - 3901492 | 19215.5 |
| fimbrial protein | BK664_17865 | Not Available | Negative | 3901497 - 3903584 | 75075.7 |
| pilus assembly protein pilp | BK664_17870 | Not Available | Negative | 3903598 - 3904125 | 19202.9 |
| pilus assembly protein pilp | BK664_17875 | Not Available | Negative | 3904122 - 3904745 | 23188.0 |
| pilus assembly protein piln | BK664_17880 | Not Available | Negative | 3904742 - 3905308 | 20873.3 |
| pilus assembly protein pilm | BK664_17885 | Not Available | Negative | 3905308 - 3906372 | 38203.9 |
| peptidase | BK664_17890 | Not Available | Positive | 3906589 - 3909033 | 88870.0 |
| malate dehydrogenase | BK664_17895 | Not Available | Negative | 3909301 - 3910569 | 45009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
