Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | BK664_17750 | Not Available | Positive | 3870736 - 3872280 | 56308.8 |
| thioesterase | BK664_17755 | Not Available | Positive | 3872273 - 3872698 | 16092.5 |
| hypothetical protein | BK664_17760 | Not Available | Positive | 3872695 - 3873297 | 22081.4 |
| hypothetical protein | BK664_17765 | Not Available | Positive | 3873281 - 3875620 | 84235.5 |
| sodium:proton antiporter | BK664_17770 | Not Available | Positive | 3875617 - 3876777 | 42373.1 |
| fad-dependent oxidoreductase | BK664_17775 | Not Available | Positive | 3876764 - 3878011 | 45840.4 |
| sam-dependent methyltransferase | BK664_17780 | Not Available | Positive | 3878008 - 3878733 | 27762.2 |
| hypothetical protein | BK664_17785 | Not Available | Positive | 3878733 - 3879215 | 17924.9 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | BK664_17790 | Not Available | Positive | 3879212 - 3880408 | 42039.9 |
| 3-hydroxylacyl-acp dehydratase | BK664_17795 | Not Available | Positive | 3880405 - 3880866 | 16884.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
