Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_17600 | Not Available | Positive | 3829962 - 3831575 | 58237.9 |
| peptide-methionine (s)-s-oxide reductase | BK664_17605 | Not Available | Positive | 3831849 - 3832496 | 23665.2 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | BK664_17610 | Not Available | Negative | 3832638 - 3833477 | 31813.4 |
| hypothetical protein | BK664_17615 | Not Available | Negative | 3833757 - 3834080 | 12007.5 |
| hypothetical protein | BK664_17620 | Not Available | Negative | 3834414 - 3834791 | 14001.6 |
| type iv secretion protein rhs | BK664_17625 | Not Available | Negative | 3834784 - 3839445 | 175323.0 |
| hypothetical protein | BK664_17630 | Not Available | Negative | 3839445 - 3840182 | 27743.0 |
| type iv secretion protein rhs | BK664_17635 | Not Available | Negative | 3840172 - 3842190 | 74883.4 |
| sodium/proline symporter | BK664_17640 | Not Available | Negative | 3842556 - 3844040 | 53083.6 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | BK664_17645 | Not Available | Positive | 3844505 - 3848458 | 142663.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
