Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_17550 | Not Available | Positive | 3819299 - 3821494 | 82810.4 |
| hypothetical protein | BK664_17555 | Not Available | Negative | 3821786 - 3822091 | 11159.3 |
| leucine abc transporter subunit substrate-binding protein livk | BK664_17560 | Not Available | Positive | 3822430 - 3823557 | 39621.3 |
| branched-chain amino acid abc transporter permease livh | BK664_17565 | Not Available | Positive | 3823790 - 3824713 | 32353.6 |
| high-affinity branched-chain amino acid abc transporter permease livm | BK664_17570 | Not Available | Positive | 3824710 - 3825966 | 45885.9 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BK664_17575 | Not Available | Positive | 3825963 - 3826730 | 28222.7 |
| abc transporter atp-binding protein | BK664_17580 | Not Available | Positive | 3826731 - 3827432 | 25420.1 |
| lysr family transcriptional regulator | BK664_17585 | Not Available | Negative | 3827537 - 3828448 | 34060.1 |
| short chain dehydrogenase | BK664_17590 | Not Available | Positive | 3828554 - 3829153 | 20962.3 |
| hypothetical protein | BK664_17595 | Not Available | Positive | 3829213 - 3829866 | 23562.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
