Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,4-diacetamido-2,4, 6-trideoxy-beta-l-altropyranose hydrolase | BK654_09970 | Not Available | Negative | 2295670 - 2297175 | 54952.8 |
| pseudaminic acid cytidylyltransferase | BK654_09975 | Not Available | Negative | 2297172 - 2297873 | 26015.1 |
| udp-4-amino-4, 6-dideoxy-n-acetyl-beta-l-altrosamine transaminase | BK654_09980 | Not Available | Negative | 2297876 - 2299036 | 42735.1 |
| udp-n-acetylglucosamine 4,6-dehydratase (inverting) | BK654_09985 | Not Available | Negative | 2299033 - 2300034 | 36980.3 |
| glycosyl transferase family 2 | BK654_09990 | Not Available | Negative | 2300060 - 2302993 | 109822.0 |
| cephalosporin hydroxylase | BK654_09995 | Not Available | Negative | 2303044 - 2303781 | 27649.1 |
| methyltransferase | BK654_10000 | Not Available | Negative | 2303797 - 2304867 | 39504.8 |
| epimerase | BK654_10005 | Not Available | Negative | 2304857 - 2305714 | 31319.6 |
| sam-dependent methyltransferase | BK654_10010 | Not Available | Negative | 2305711 - 2306937 | 44755.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BK654_10015 | Not Available | Negative | 2306934 - 2307494 | 20819.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
