Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | BK664_17450 | Not Available | Positive | 3795033 - 3796292 | 46201.0 |
| 4-carboxymuconolactone decarboxylase | BK664_17455 | Not Available | Negative | 3796444 - 3796836 | 14776.7 |
| 3-oxoadipate enol-lactonase | BK664_17460 | Not Available | Negative | 3796847 - 3797653 | 28649.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | BK664_17465 | Not Available | Negative | 3797665 - 3799029 | 48583.6 |
| alpha-ketoglutarate permease | BK664_17470 | Not Available | Negative | 3799075 - 3800379 | 47635.9 |
| protocatechuate 3,4-dioxygenase subunit alpha | BK664_17475 | Not Available | Negative | 3800570 - 3801136 | 20760.4 |
| protocatechuate 3,4-dioxygenase subunit beta | BK664_17480 | Not Available | Negative | 3801138 - 3801842 | 26307.0 |
| 3-oxoadipyl-coa thiolase | BK664_17485 | Not Available | Negative | 3801879 - 3803081 | 41669.2 |
| 3-oxoadipate--succinyl-coa transferase subunit b | BK664_17490 | Not Available | Negative | 3803081 - 3803860 | 26987.3 |
| 3-oxoadipate--succinyl-coa transferase subunit a | BK664_17495 | Not Available | Negative | 3803860 - 3804717 | 30980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
