Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK664_17250 | Not Available | Negative | 3750997 - 3752328 | 47659.5 |
| hydroxymethylglutaryl-coa lyase | BK664_17255 | Not Available | Negative | 3752513 - 3753439 | 33136.1 |
| carnitine dehydratase | BK664_17260 | Not Available | Negative | 3753436 - 3754629 | 41876.5 |
| lysr family transcriptional regulator | BK664_17265 | Not Available | Negative | 3754861 - 3755769 | 33293.7 |
| 2-amino-3-ketobutyrate coa ligase | BK664_17270 | Not Available | Positive | 3756009 - 3757244 | 45043.0 |
| mfs transporter | BK664_17275 | Not Available | Positive | 3757266 - 3758432 | 40528.8 |
| l-threonine dehydrogenase | BK664_17280 | Not Available | Negative | 3758429 - 3759577 | 40211.8 |
| duf4917 domain-containing protein | BK664_17285 | Not Available | Positive | 3759734 - 3760753 | 37800.7 |
| dna-binding protein | BK664_17290 | Not Available | Negative | 3760866 - 3761408 | 20165.2 |
| aldolase | BK664_17295 | Not Available | Positive | 3761567 - 3762349 | 28624.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
