Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | BK664_17200 | Not Available | Negative | 3742606 - 3743376 | 27949.2 |
| inclusion body protein | BK664_17205 | Not Available | Positive | 3744245 - 3744748 | 18510.0 |
| hypothetical protein | BK664_17210 | Not Available | Positive | 3744873 - 3745412 | 19405.1 |
| hypothetical protein | BK664_17215 | Not Available | Positive | 3745537 - 3745947 | 15408.9 |
| duf305 domain-containing protein | BK664_17220 | Not Available | Negative | 3745994 - 3746497 | 18198.6 |
| diguanylate cyclase | BK664_17225 | Not Available | Negative | 3746848 - 3748197 | 50077.9 |
| lysine transporter lyse | BK664_17230 | Not Available | Negative | 3748283 - 3748921 | 22440.0 |
| glutathione transferase | BK664_17235 | Not Available | Negative | 3748987 - 3749403 | 15698.6 |
| lysr family transcriptional regulator | BK664_17240 | Not Available | Negative | 3749414 - 3750355 | 34217.5 |
| hypothetical protein | BK664_17245 | Not Available | Positive | 3750433 - 3750921 | 16675.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
