Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase | BK664_17150 | Not Available | Positive | 3733592 - 3734284 | 26477.0 |
| alpha/beta hydrolase | BK664_17155 | Not Available | Positive | 3734597 - 3735481 | 33341.6 |
| Trna-gly | Not Available | Not Available | Positive | 3735755 - 3735828 | Not Available |
| nad/fad-utilizing enzyme apparently involved in cell division | BK664_17165 | Not Available | Positive | 3736122 - 3736682 | 20659.5 |
| cytochrome c oxidase subunit iv | BK664_17170 | Not Available | Negative | 3736715 - 3737032 | 12073.4 |
| bb3-type cytochrome oxidase subunit iv | BK664_17175 | Not Available | Negative | 3737046 - 3737759 | 26161.9 |
| cytochrome c oxidase subunit iii | BK664_17180 | Not Available | Negative | 3737766 - 3738458 | 25610.5 |
| cytochrome c oxidase subunit i | BK664_17185 | Not Available | Negative | 3738455 - 3740230 | 65784.5 |
| cytochrome b | BK664_17190 | Not Available | Negative | 3740280 - 3741746 | 53009.9 |
| hypothetical protein | BK664_17195 | Not Available | Positive | 3742185 - 3742526 | 12682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
