Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK664_17050 | Not Available | Negative | 3711554 - 3712225 | 24662.0 |
| porin | BK664_17055 | Not Available | Positive | 3712459 - 3713751 | 47127.1 |
| tricarboxylic transporter | BK664_17060 | Not Available | Positive | 3713791 - 3714768 | 35003.2 |
| hypothetical protein | BK664_17065 | Not Available | Positive | 3714828 - 3715286 | 16647.4 |
| tripartite tricarboxylate transporter tcta | BK664_17070 | Not Available | Positive | 3715288 - 3716802 | 52969.9 |
| hypothetical protein | BK664_17075 | Not Available | Positive | 3716795 - 3717835 | 37594.9 |
| hypothetical protein | BK664_17080 | Not Available | Negative | 3717911 - 3718354 | 16509.5 |
| uracil-dna glycosylase | BK664_17085 | Not Available | Negative | 3718515 - 3719210 | 25889.1 |
| enoyl-coa hydratase | BK664_17090 | Not Available | Positive | 3719343 - 3720446 | 40998.4 |
| hypothetical protein | BK664_17095 | Not Available | Negative | 3720481 - 3720840 | 12233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
