Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48 | BK664_17000 | Not Available | Positive | 3699996 - 3701429 | 53118.6 |
| serine peptidase | BK664_17005 | Not Available | Negative | 3701507 - 3702934 | 50795.2 |
| rna polymerase subunit sigma | BK664_17010 | Not Available | Negative | 3703115 - 3704071 | 34985.6 |
| rna polymerase subunit sigma | BK664_17015 | Not Available | Negative | 3704080 - 3704667 | 20892.7 |
| rna polymerase sigma factor rpoe | BK664_17020 | Not Available | Negative | 3704698 - 3705279 | 22236.3 |
| l-aspartate oxidase | BK664_17025 | Not Available | Positive | 3705838 - 3707454 | 59665.0 |
| hypothetical protein | BK664_17030 | Not Available | Negative | 3707859 - 3708113 | 10317.5 |
| folate-binding protein ygfz | BK664_17035 | Not Available | Positive | 3708263 - 3709204 | 33934.9 |
| histidine kinase | BK664_17040 | Not Available | Positive | 3709239 - 3710060 | 30735.1 |
| histidine kinase | BK664_17045 | Not Available | Negative | 3710176 - 3711561 | 50477.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
