Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | BK664_16945 | Not Available | Positive | 3692071 - 3693237 | 40757.2 |
| Trna-ser | Not Available | Not Available | Positive | 3693324 - 3693413 | Not Available |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BK664_16955 | Not Available | Negative | 3693497 - 3694210 | 26746.3 |
| mbl fold metallo-hydrolase | BK664_16960 | Not Available | Negative | 3694239 - 3694997 | 27721.2 |
| hypothetical protein | BK664_16965 | Not Available | Negative | 3695002 - 3696117 | 40173.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BK664_16970 | Not Available | Negative | 3696135 - 3697013 | 31223.0 |
| glycine cleavage system protein r | BK664_16980 | Not Available | Positive | 3697343 - 3697903 | 20545.5 |
| peroxiredoxin | BK664_16985 | Not Available | Positive | 3697914 - 3698387 | 17265.5 |
| ai-2e family transporter | BK664_16990 | Not Available | Negative | 3698556 - 3699626 | 39614.5 |
| response regulator sira | BK664_16995 | Not Available | Negative | 3699658 - 3699897 | 8658.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
