Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | BK664_16895 | Not Available | Negative | 3681954 - 3682616 | 24648.9 |
| phosphoethanolamine transferase | BK664_16900 | Not Available | Negative | 3682690 - 3684339 | 61132.1 |
| glutamine synthetase | BK664_16905 | Not Available | Negative | 3684519 - 3685901 | 50543.2 |
| mfs transporter | BK664_16910 | Not Available | Positive | 3686316 - 3687500 | 42548.8 |
| eama family transporter | BK664_16915 | Not Available | Positive | 3687517 - 3688434 | 32841.4 |
| lysr family transcriptional regulator | BK664_16920 | Not Available | Positive | 3688566 - 3689501 | 35209.3 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BK664_16925 | Not Available | Negative | 3689505 - 3689870 | 13443.2 |
| lysr family transcriptional regulator | BK664_16930 | Not Available | Negative | 3689928 - 3690851 | 34254.5 |
| hypothetical protein | BK664_16935 | Not Available | Negative | 3691022 - 3691213 | 7218.56 |
| hypothetical protein | BK664_16940 | Not Available | Negative | 3691504 - 3691848 | 12626.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
