Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside/nucleotide kinase family protein | BK664_16590 | Not Available | Negative | 3597008 - 3597667 | 24016.5 |
| abc transporter | BK664_16595 | Not Available | Negative | 3597957 - 3598883 | 32385.9 |
| ribose abc transporter permease | BK664_16600 | Not Available | Negative | 3598934 - 3599956 | 35176.2 |
| d-xylose abc transporter atp-binding protein | BK664_16605 | Not Available | Negative | 3599953 - 3601512 | 55625.4 |
| laci family transcriptional regulator | BK664_16610 | Not Available | Positive | 3601985 - 3602977 | 36237.9 |
| glucose-6-phosphate isomerase | BK664_16615 | Not Available | Positive | 3603375 - 3605039 | 61851.5 |
| maltoporin | BK664_16620 | Not Available | Positive | 3605479 - 3606705 | 45800.0 |
| hypothetical protein | BK664_16625 | Not Available | Positive | 3607134 - 3607439 | 11248.0 |
| hypothetical protein | BK664_16630 | Not Available | Negative | 3607774 - 3608094 | 11965.3 |
| gaba permease | BK664_16635 | Not Available | Positive | 3608732 - 3610132 | 50153.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
