Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_16540 | Not Available | Negative | 3585538 - 3586494 | 33909.6 |
| abc transporter substrate-binding protein | BK664_16545 | Not Available | Negative | 3586540 - 3588177 | 59637.2 |
| fad-dependent oxidoreductase | BK664_16550 | Not Available | Negative | 3588272 - 3589546 | 45393.4 |
| haloacid dehalogenase, type ii | BK664_16555 | Not Available | Negative | 3589592 - 3590260 | 25142.2 |
| aldehyde dehydrogenase | BK664_16560 | Not Available | Negative | 3590751 - 3592223 | 52704.1 |
| gnat family n-acetyltransferase | BK664_16565 | Not Available | Positive | 3592466 - 3593323 | 30342.4 |
| cupin | BK664_16570 | Not Available | Positive | 3593364 - 3594077 | 25186.8 |
| ggdef domain-containing protein | BK664_16575 | Not Available | Negative | 3594205 - 3595293 | 40571.4 |
| carbohydrate kinase | BK664_16580 | Not Available | Negative | 3595693 - 3596631 | 34082.8 |
| hypothetical protein | BK664_16585 | Not Available | Negative | 3596656 - 3596940 | 10004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
