Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate transaminase | BK664_16490 | Not Available | Negative | 3573386 - 3574678 | 46208.0 |
| glyoxylate/hydroxypyruvate reductase a | BK664_16495 | Not Available | Positive | 3574951 - 3575877 | 34377.5 |
| tartrate dehydrogenase | BK664_16500 | Not Available | Negative | 3576001 - 3577080 | 39998.9 |
| succinate-semialdehyde dehydrogenase (nadp(+)) | BK664_16505 | Not Available | Negative | 3577107 - 3578564 | 52025.0 |
| acetylornithine deacetylase (arge) | BK664_16510 | Not Available | Negative | 3578840 - 3579997 | 41966.6 |
| sarcosine oxidase subunit beta | BK664_16515 | Not Available | Negative | 3579994 - 3581148 | 41803.2 |
| fad/nad(p)-binding oxidoreductase | BK664_16520 | Not Available | Negative | 3581145 - 3582536 | 49167.4 |
| nad(fad)-dependent dehydrogenase | BK664_16525 | Not Available | Negative | 3582518 - 3582826 | 11250.5 |
| abc transporter | BK664_16530 | Not Available | Negative | 3582823 - 3584664 | 65959.1 |
| dna-directed rna polymerase subunit alpha | BK664_16535 | Not Available | Negative | 3584666 - 3585541 | 30738.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
