Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase | BK664_16440 | Not Available | Negative | 3561715 - 3563061 | 50724.3 |
| hypothetical protein | BK664_16445 | Not Available | Negative | 3563178 - 3563621 | 16525.4 |
| histidine kinase | BK664_16450 | Not Available | Negative | 3564564 - 3565004 | 15952.7 |
| nitrite reductase small subunit | BK664_16455 | Not Available | Negative | 3565045 - 3565422 | 13725.3 |
| nitrite reductase large subunit | BK664_16460 | Not Available | Negative | 3565422 - 3567983 | 92690.0 |
| porin | BK664_16465 | Not Available | Negative | 3568345 - 3569688 | 48709.7 |
| hypothetical protein | BK664_16470 | Not Available | Negative | 3569755 - 3570960 | 45268.5 |
| nickel uptake transporter family protein | BK664_16475 | Not Available | Negative | 3570989 - 3571765 | 28585.8 |
| asnc family transcriptional regulator | BK664_16480 | Not Available | Negative | 3572100 - 3572588 | 18402.4 |
| 2-haloalkanoic acid dehalogenase | BK664_16485 | Not Available | Negative | 3572634 - 3573290 | 24514.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
