Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | BK664_16390 | Not Available | Positive | 3548467 - 3549306 | 29772.1 |
| cytochrome c oxidase cbb3 | BK664_16395 | Not Available | Positive | 3549303 - 3550796 | 54592.1 |
| short-chain dehydrogenase | BK664_16400 | Not Available | Negative | 3551598 - 3552341 | 25699.9 |
| nosl protein | BK664_16405 | Not Available | Negative | 3552452 - 3552955 | 18096.7 |
| hypothetical protein | BK664_16410 | Not Available | Negative | 3552989 - 3553819 | 29328.8 |
| copper abc transporter atp-binding protein | BK664_16415 | Not Available | Negative | 3553816 - 3554739 | 33491.7 |
| copper-binding protein | BK664_16420 | Not Available | Negative | 3554736 - 3556025 | 47367.0 |
| nitrous-oxide reductase | BK664_16425 | Not Available | Negative | 3556053 - 3557972 | 70966.2 |
| regulatory protein nosr | BK664_16430 | Not Available | Negative | 3558029 - 3560242 | 82948.0 |
| oxygen-independent coproporphyrinogen iii oxidase | BK664_16435 | Not Available | Negative | 3560320 - 3561708 | 52349.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
