Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | BK664_16340 | Not Available | Negative | 3540759 - 3541562 | 29958.2 |
| nitrite reductase | BK664_16345 | Not Available | Positive | 3541762 - 3543450 | 61837.8 |
| cytochrome c biogenesis protein ccsa | BK664_16350 | Not Available | Positive | 3543475 - 3543789 | 10916.3 |
| hypothetical protein | BK664_16355 | Not Available | Positive | 3543808 - 3544131 | 11203.7 |
| protein nirf | BK664_16360 | Not Available | Positive | 3544128 - 3545306 | 42633.8 |
| asnc family protein | BK664_16365 | Not Available | Positive | 3545308 - 3545766 | 17285.8 |
| asnc family protein | BK664_16370 | Not Available | Positive | 3545763 - 3546278 | 19518.7 |
| asnc family protein | BK664_16375 | Not Available | Positive | 3546271 - 3546714 | 16887.4 |
| nitrite reductase | BK664_16380 | Not Available | Positive | 3546689 - 3547192 | 19099.1 |
| heme d1 biosynthesis radical sam protein nirj | BK664_16385 | Not Available | Positive | 3547218 - 3548396 | 43832.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
