Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-sulfur cluster repair di-iron protein | BK664_16290 | Not Available | Positive | 3531886 - 3532560 | 25411.5 |
| hypothetical protein | BK664_16295 | Not Available | Negative | 3532636 - 3533073 | 16125.3 |
| short-chain dehydrogenase | BK664_16300 | Not Available | Negative | 3533102 - 3534292 | 43253.8 |
| transcription factor | BK664_16305 | Not Available | Positive | 3534889 - 3535572 | 26357.0 |
| protein dnrp | BK664_16310 | Not Available | Positive | 3535569 - 3535766 | 7587.51 |
| nitric oxide reductase activation protein nord | BK664_16315 | Not Available | Negative | 3535849 - 3537690 | 70304.9 |
| nitric-oxide reductase large subunit | BK664_16320 | Not Available | Negative | 3537769 - 3539196 | 53217.6 |
| cytochrome c | BK664_16325 | Not Available | Negative | 3539200 - 3539640 | 16562.8 |
| hypothetical protein | BK664_16330 | Not Available | Negative | 3539920 - 3540177 | 9206.86 |
| cytochrome-c oxidase | BK664_16335 | Not Available | Negative | 3540188 - 3540775 | 21950.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
