Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | BK664_15875 | Not Available | Positive | 3441851 - 3442855 | 35968.6 |
| transposase | BK664_15890 | Not Available | Positive | 3444565 - 3444897 | 12068.5 |
| acetyl-coa acetyltransferase | BK664_15900 | Not Available | Negative | 3445417 - 3446598 | 41345.0 |
| acetoacetate--coa ligase | BK664_15905 | Not Available | Negative | 3446640 - 3448646 | 74108.6 |
| acyl-coa dehydrogenase | BK664_15910 | Not Available | Negative | 3448649 - 3449815 | 42613.2 |
| hypothetical protein | BK664_15915 | Not Available | Positive | 3450014 - 3450808 | 29526.6 |
| marr family transcriptional regulator | BK664_15920 | Not Available | Negative | 3450891 - 3451427 | 20452.8 |
| short-chain dehydrogenase | BK664_15925 | Not Available | Negative | 3451569 - 3452360 | 27628.6 |
| electron transfer flavoprotein subunit alpha | BK664_15930 | Not Available | Negative | 3452350 - 3453312 | 32787.3 |
| electron transporter rnfb | BK664_15935 | Not Available | Negative | 3453315 - 3454064 | 26268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
