Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_15825 | Not Available | Negative | 3428703 - 3430334 | 59633.5 |
| short chain dehydrogenase | BK664_15830 | Not Available | Negative | 3430948 - 3431556 | 21642.1 |
| nodd transcription activator | BK664_15835 | Not Available | Positive | 3431652 - 3432539 | 32875.4 |
| bcr/cfla family drug resistance efflux transporter | BK664_15840 | Not Available | Positive | 3433045 - 3434256 | 41280.1 |
| aldehyde dehydrogenase puuc | BK664_15845 | Not Available | Positive | 3434968 - 3436461 | 53034.5 |
| amino acid permease | BK664_15850 | Not Available | Positive | 3436526 - 3438001 | 53038.7 |
| polyketide cyclase | BK664_15855 | Not Available | Positive | 3438063 - 3438548 | 18179.5 |
| hypothetical protein | BK664_15860 | Not Available | Negative | 3439290 - 3439502 | 8133.16 |
| marr family transcriptional regulator | BK664_15865 | Not Available | Negative | 3440480 - 3440935 | 16874.6 |
| aromatic compound catabolic protein | BK664_15870 | Not Available | Positive | 3440994 - 3441554 | 20011.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
