Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | BK664_15720 | Not Available | Positive | 3403557 - 3404855 | 47167.2 |
| nitric oxide synthase | BK664_15725 | Not Available | Positive | 3404852 - 3405292 | 15575.2 |
| amidotransferase | BK664_15730 | Not Available | Positive | 3405394 - 3406113 | 26851.8 |
| glutamine synthetase | BK664_15735 | Not Available | Positive | 3406424 - 3407797 | 50960.9 |
| amino acid abc transporter substrate-binding protein | BK664_15740 | Not Available | Positive | 3407794 - 3408513 | 26224.2 |
| gntr family transcriptional regulator | BK664_15745 | Not Available | Positive | 3408736 - 3409482 | 27316.7 |
| histidine kinase | BK664_15750 | Not Available | Positive | 3409602 - 3410360 | 28039.8 |
| hypothetical protein | BK664_15755 | Not Available | Negative | 3410918 - 3411919 | 37350.2 |
| amino acid permease | BK664_15760 | Not Available | Negative | 3412072 - 3413586 | 53781.6 |
| hydroxyglutarate oxidase | BK664_15765 | Not Available | Negative | 3414186 - 3415436 | 45555.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
