Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_15400 | Not Available | Negative | 3327993 - 3328841 | 29746.8 |
| abc transporter permease | BK664_15405 | Not Available | Negative | 3328838 - 3329686 | 29667.1 |
| glycine/betaine abc transporter | BK664_15410 | Not Available | Negative | 3329683 - 3330801 | 40029.7 |
| glycine/betaine abc transporter | BK664_15415 | Not Available | Negative | 3330877 - 3331728 | 31398.8 |
| oxidoreductase | BK664_15420 | Not Available | Negative | 3331797 - 3333143 | 48322.4 |
| aldehyde dehydrogenase | BK664_15425 | Not Available | Negative | 3333140 - 3334657 | 54453.7 |
| dihydrodipicolinate synthase family protein | BK664_15430 | Not Available | Negative | 3334650 - 3335561 | 33197.6 |
| gntr family transcriptional regulator | BK664_15435 | Not Available | Negative | 3335558 - 3336271 | 27146.6 |
| rieske (2fe-2s) protein | BK664_15440 | Not Available | Positive | 3336915 - 3338150 | 45894.1 |
| lysr family transcriptional regulator | BK664_15445 | Not Available | Negative | 3338260 - 3339222 | 36067.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
