Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK664_15185 | Not Available | Positive | 3286404 - 3287051 | 23408.4 |
| hypothetical protein | BK664_15190 | Not Available | Positive | 3287655 - 3288023 | 13342.1 |
| polyketide cyclase | BK664_15195 | Not Available | Positive | 3288188 - 3289126 | 34032.0 |
| lysr family transcriptional regulator | BK664_15200 | Not Available | Positive | 3289194 - 3290123 | 34018.7 |
| metal-dependent hydrolase | BK664_15205 | Not Available | Negative | 3290116 - 3291099 | 36209.2 |
| mfs transporter | BK664_15215 | Not Available | Positive | 3291395 - 3292699 | 46709.5 |
| fad-dependent oxidoreductase | BK664_15220 | Not Available | Positive | 3292716 - 3293840 | 39987.8 |
| damage-inducible protein dinb | BK664_15225 | Not Available | Positive | 3293919 - 3294515 | 22396.8 |
| lysr family transcriptional regulator | BK664_15230 | Not Available | Negative | 3294436 - 3295356 | 33864.0 |
| lysr family transcriptional regulator | BK664_15235 | Not Available | Negative | 3295537 - 3296436 | 33168.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
