Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_14980 | Not Available | Positive | 3246520 - 3246828 | 11012.8 |
| cupin | BK664_14985 | Not Available | Positive | 3247243 - 3247587 | 12468.8 |
| fmn-dependent nadh-azoreductase | BK664_14990 | Not Available | Negative | 3247684 - 3248340 | 24636.6 |
| lysr family transcriptional regulator | BK664_14995 | Not Available | Positive | 3248447 - 3249301 | 30901.5 |
| hypothetical protein | BK664_15000 | Not Available | Negative | 3249438 - 3249752 | 11524.7 |
| hypothetical protein | BK664_15005 | Not Available | Negative | 3249968 - 3250240 | 10008.3 |
| hypothetical protein | BK664_15010 | Not Available | Negative | 3253249 - 3254487 | 45916.3 |
| mate family efflux transporter | BK664_15015 | Not Available | Positive | 3254724 - 3256082 | 48205.9 |
| hypothetical protein | BK664_15020 | Not Available | Negative | 3256119 - 3256820 | 24097.3 |
| thiamine biosynthesis protein apbe | BK664_15025 | Not Available | Negative | 3256890 - 3257813 | 32755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
