Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | BK664_14860 | Not Available | Negative | 3225295 - 3226431 | 39934.2 |
| xylose abc transporter atp-binding protein | BK664_14865 | Not Available | Negative | 3226432 - 3227988 | 56172.3 |
| d-xylose abc transporter substrate-binding protein | BK664_14870 | Not Available | Negative | 3228068 - 3229069 | 35874.0 |
| xylose isomerase | BK664_14875 | Not Available | Negative | 3229219 - 3230535 | 49470.2 |
| xylr family transcriptional regulator | BK664_14880 | Not Available | Positive | 3230712 - 3231887 | 43005.8 |
| methylmalonyl-coa epimerase | BK664_14885 | Not Available | Positive | 3232124 - 3232579 | 17027.5 |
| hypothetical protein | BK664_14895 | Not Available | Positive | 3233395 - 3233610 | 7652.65 |
| hypothetical protein | BK664_14910 | Not Available | Negative | 3235530 - 3235847 | 11621.1 |
| tetr family transcriptional regulator | BK664_14915 | Not Available | Negative | 3236022 - 3236585 | 20514.5 |
| glutathione s-transferase | BK664_14920 | Not Available | Negative | 3236835 - 3237536 | 26579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
