Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | BK664_14595 | Not Available | Negative | 3171256 - 3171966 | 25702.7 |
| hypothetical protein | BK664_14605 | Not Available | Negative | 3172543 - 3172842 | 10226.3 |
| helix-turn-helix transcriptional regulator | BK664_14610 | Not Available | Positive | 3173152 - 3174174 | 37560.9 |
| hydrolase | BK664_14615 | Not Available | Positive | 3174324 - 3176192 | 65966.5 |
| amidohydrolase | BK664_14620 | Not Available | Positive | 3176211 - 3177953 | 62865.2 |
| hypothetical protein | BK664_14625 | Not Available | Positive | 3178064 - 3178804 | 27257.6 |
| cytosine permease | BK664_14630 | Not Available | Positive | 3178855 - 3180267 | 50584.3 |
| gnat family n-acetyltransferase | BK664_14635 | Not Available | Positive | 3180393 - 3180851 | 16673.7 |
| hypothetical protein | BK664_14640 | Not Available | Positive | 3181566 - 3181925 | 13086.6 |
| toxin-antitoxin system antitoxin subunit | BK664_14645 | Not Available | Positive | 3182220 - 3182795 | 20830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
