Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent isocitrate dehydrogenase | BK664_14345 | Not Available | Positive | 3126935 - 3128191 | 45468.9 |
| dna-binding protein | BK664_14350 | Not Available | Negative | 3128253 - 3128534 | 10057.9 |
| atp-dependent clp protease adapter clps | BK664_14355 | Not Available | Positive | 3128760 - 3129143 | 14268.1 |
| atp-dependent clp protease atp-binding subunit clpa | BK664_14360 | Not Available | Positive | 3129174 - 3131444 | 83361.8 |
| translation initiation factor if-1 | BK664_14365 | Not Available | Negative | 3131601 - 3131819 | 8303.06 |
| arginyltransferase | BK664_14370 | Not Available | Negative | 3131931 - 3132638 | 27811.3 |
| leucyl/phenylalanyl-trna--protein transferase | BK664_14375 | Not Available | Negative | 3132696 - 3133376 | 25807.7 |
| thioredoxin-disulfide reductase | BK664_14380 | Not Available | Negative | 3133441 - 3134400 | 34084.4 |
| cell division protein ftsk | BK664_14385 | Not Available | Positive | 3134708 - 3137113 | 87552.6 |
| outer membrane lipoprotein carrier protein lola | BK664_14390 | Not Available | Positive | 3137179 - 3137802 | 22865.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
