Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | BK664_14295 | Not Available | Negative | 3114604 - 3115017 | 14989.7 |
| isocitrate lyase | BK664_14300 | Not Available | Negative | 3115723 - 3117048 | 48477.0 |
| secretin | BK664_14305 | Not Available | Negative | 3117561 - 3118322 | 27721.5 |
| gnat family n-acetyltransferase | BK664_14310 | Not Available | Negative | 3118560 - 3118985 | 15794.9 |
| cupin | BK664_14315 | Not Available | Negative | 3118978 - 3120147 | 44120.2 |
| adenylosuccinate lyase | BK664_14320 | Not Available | Negative | 3120234 - 3121604 | 50660.7 |
| lysogenization regulator hfld | BK664_14325 | Not Available | Negative | 3121730 - 3122353 | 23077.3 |
| trna 2-thiouridine(34) synthase mnma | BK664_14330 | Not Available | Negative | 3122350 - 3123495 | 42524.4 |
| nudix hydrolase | BK664_14335 | Not Available | Negative | 3123555 - 3124001 | 16752.9 |
| isocitrate dehydrogenase (nadp(+)) | BK664_14340 | Not Available | Negative | 3124213 - 3126438 | 79834.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
