Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | BK664_14195 | Not Available | Negative | 3089963 - 3090637 | 25677.2 |
| type i secretion protein tolc | BK664_14200 | Not Available | Positive | 3091102 - 3092373 | 46148.0 |
| efflux transporter periplasmic adaptor subunit | BK664_14205 | Not Available | Positive | 3092423 - 3093622 | 42069.4 |
| cation transporter | BK664_14210 | Not Available | Positive | 3093688 - 3096837 | 112813.0 |
| hypothetical protein | BK664_14215 | Not Available | Positive | 3097063 - 3097263 | 7223.63 |
| hypothetical protein | BK664_14220 | Not Available | Positive | 3097343 - 3097675 | 11799.3 |
| porin | BK664_14225 | Not Available | Negative | 3097834 - 3099159 | 48391.5 |
| hypothetical protein | BK664_14230 | Not Available | Negative | 3099617 - 3099802 | 6987.59 |
| nadh-quinone oxidoreductase subunit n | BK664_14235 | Not Available | Negative | 3100079 - 3101542 | 51743.9 |
| nadh-quinone oxidoreductase subunit m | BK664_14240 | Not Available | Negative | 3101550 - 3103082 | 55763.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
