Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | BK664_14145 | Not Available | Positive | 3078691 - 3079785 | 40855.4 |
| abc transporter atp-binding protein | BK664_14150 | Not Available | Positive | 3079785 - 3080876 | 40781.1 |
| abc transporter permease | BK664_14155 | Not Available | Positive | 3080879 - 3081745 | 32326.1 |
| sugar abc transporter permease | BK664_14160 | Not Available | Positive | 3081754 - 3082554 | 29855.1 |
| hypothetical protein | BK664_14165 | Not Available | Positive | 3082565 - 3082837 | 10091.7 |
| abc transporter substrate-binding protein | BK664_14170 | Not Available | Positive | 3082885 - 3084627 | 64670.3 |
| alpha/beta hydrolase | BK664_14175 | Not Available | Negative | 3084673 - 3085548 | 33063.4 |
| methylase | BK664_14180 | Not Available | Negative | 3085548 - 3086507 | 35700.7 |
| hypothetical protein | BK664_14185 | Not Available | Negative | 3086504 - 3087739 | 45930.4 |
| two-component sensor histidine kinase | BK664_14190 | Not Available | Negative | 3088557 - 3089966 | 51418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
