Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_14095 | Not Available | Positive | 3062905 - 3066579 | 130976.0 |
| marr family transcriptional regulator | BK664_14100 | Not Available | Positive | 3066819 - 3067292 | 17421.4 |
| multidrug rnd transporter | BK664_14105 | Not Available | Positive | 3067289 - 3068758 | 52085.0 |
| hlyd family secretion protein | BK664_14110 | Not Available | Positive | 3068774 - 3069976 | 43108.9 |
| mfs transporter | BK664_14115 | Not Available | Positive | 3070142 - 3071671 | 54987.0 |
| udp-2,3-diacylglucosamine diphosphatase | BK664_14120 | Not Available | Negative | 3071810 - 3072562 | 28290.4 |
| peptidylprolyl isomerase | BK664_14125 | Not Available | Negative | 3072559 - 3073062 | 18327.8 |
| glutamine--trna ligase | BK664_14130 | Not Available | Positive | 3073340 - 3075037 | 64555.0 |
| cysteine--trna ligase | BK664_14135 | Not Available | Positive | 3075055 - 3076437 | 51325.1 |
| sigma-54-dependent fis family transcriptional regulator | BK664_14140 | Not Available | Negative | 3076566 - 3078419 | 68596.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
