Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa acetyltransferase | BK654_09620 | Not Available | Negative | 2226787 - 2227971 | 42206.7 |
| polyphosphate:amp phosphotransferase | BK654_09625 | Not Available | Negative | 2228074 - 2229597 | 59350.1 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | BK654_09630 | Not Available | Positive | 2229748 - 2231730 | 72378.1 |
| asparagine synthase (glutamine-hydrolyzing) | BK654_09635 | Not Available | Positive | 2232002 - 2233774 | 65589.4 |
| gnat family n-acetyltransferase | BK654_09640 | Not Available | Positive | 2233778 - 2235526 | 63908.0 |
| peptidase m42 | BK654_09645 | Not Available | Positive | 2235717 - 2236907 | 42881.7 |
| hypothetical protein | BK654_09650 | Not Available | Positive | 2237117 - 2237344 | 8615.27 |
| carbon storage regulator | BK654_09655 | Not Available | Negative | 2237333 - 2237533 | 7235.82 |
| hypothetical protein | BK654_09660 | Not Available | Negative | 2237683 - 2238015 | 12167.1 |
| short chain dehydrogenase | BK654_09665 | Not Available | Negative | 2238073 - 2238888 | 29587.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
