Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspa | BK664_13735 | Not Available | Positive | 2995340 - 2995843 | 18487.2 |
| transcriptional regulator cysb | BK664_13740 | Not Available | Positive | 2995990 - 2996964 | 36081.9 |
| transcription elongation factor greab | BK664_13745 | Not Available | Negative | 2996974 - 2997456 | 17769.2 |
| hypothetical protein | BK664_13750 | Not Available | Negative | 2997471 - 2997881 | 15415.5 |
| hypothetical protein | BK664_13755 | Not Available | Positive | 2998006 - 2999148 | 43217.2 |
| elongation factor p | BK664_13760 | Not Available | Positive | 2999197 - 2999766 | 21147.1 |
| hypothetical protein | BK664_13765 | Not Available | Negative | 2999842 - 3000045 | 7325.85 |
| organic hydroperoxide resistance protein | BK664_13770 | Not Available | Negative | 3000135 - 3000554 | 14288.9 |
| marr family transcriptional regulator | BK664_13775 | Not Available | Negative | 3000900 - 3001361 | 17301.1 |
| lysr family transcriptional regulator | BK664_13780 | Not Available | Negative | 3001431 - 3002387 | 34936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
