Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | BK664_13635 | Not Available | Negative | 2977687 - 2978088 | 15509.6 |
| lysr family transcriptional regulator | BK664_13640 | Not Available | Negative | 2978183 - 2979112 | 35187.9 |
| acyl-coa dehydrogenase | BK664_13645 | Not Available | Positive | 2979278 - 2980507 | 45453.1 |
| hydrolase tatd | BK664_13650 | Not Available | Negative | 2980565 - 2981371 | 29987.8 |
| lytic transglycosylase f | BK664_13655 | Not Available | Positive | 2981607 - 2983028 | 52703.1 |
| doxx family protein | BK664_13660 | Not Available | Positive | 2983132 - 2983566 | 14776.5 |
| hypothetical protein | BK664_13665 | Not Available | Positive | 2983814 - 2984122 | 11317.7 |
| transcription elongation factor greb | BK664_13670 | Not Available | Negative | 2984141 - 2984638 | 18640.2 |
| abc transporter permease | BK664_13675 | Not Available | Negative | 2984673 - 2987177 | 89625.7 |
| abc transporter | BK664_13680 | Not Available | Negative | 2987177 - 2987860 | 24507.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
