Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | BK664_13390 | Not Available | Negative | 2922651 - 2923505 | 30610.2 |
| Trna-arg | Not Available | Not Available | Positive | 2923785 - 2923861 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2923902 - 2923977 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2924032 - 2924116 | Not Available |
| trigger factor | BK664_13410 | Not Available | Positive | 2924539 - 2925849 | 48539.8 |
| atp-dependent clp endopeptidase, proteolytic subunit clpp | BK664_13415 | Not Available | Positive | 2925943 - 2926578 | 23449.2 |
| atp-dependent protease atp-binding subunit clpx | BK664_13420 | Not Available | Positive | 2926691 - 2927974 | 46942.2 |
| endopeptidase la | BK664_13425 | Not Available | Positive | 2928136 - 2930532 | 88781.9 |
| dna-binding protein hu | BK664_13430 | Not Available | Positive | 2930680 - 2930952 | 9106.01 |
| Trna-pseudo | Not Available | Not Available | Positive | 2931006 - 2931083 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
