Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_13290 | Not Available | Negative | 2905873 - 2906244 | 13105.7 |
| shikimate 5-dehydrogenase | BK664_13295 | Not Available | Positive | 2906490 - 2907308 | 29489.3 |
| cupin | BK664_13300 | Not Available | Positive | 2907355 - 2907873 | 18753.9 |
| hypothetical protein | BK664_13305 | Not Available | Negative | 2907881 - 2908528 | 23911.8 |
| protein capi | BK664_13310 | Not Available | Positive | 2908836 - 2909813 | 36582.9 |
| dolichol-phosphate mannosyltransferase | BK664_13315 | Not Available | Positive | 2909862 - 2910602 | 27436.1 |
| lipid a biosynthesis, n-terminal | BK664_13320 | Not Available | Positive | 2910599 - 2910877 | 10576.0 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | BK664_13325 | Not Available | Positive | 2910881 - 2912401 | 57094.9 |
| sdia-regulated | BK664_13330 | Not Available | Positive | 2912398 - 2913336 | 34664.4 |
| hypothetical protein | BK664_13335 | Not Available | Positive | 2913492 - 2914001 | 18905.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
