Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class c beta-lactamase | BK664_13240 | Not Available | Negative | 2895392 - 2896549 | 41586.8 |
| glucarate dehydratase | BK664_13245 | Not Available | Negative | 2896665 - 2898008 | 49149.7 |
| mfs transporter | BK664_13250 | Not Available | Negative | 2898033 - 2899379 | 48714.2 |
| gntr family transcriptional regulator | BK664_13255 | Not Available | Positive | 2899661 - 2900374 | 26051.2 |
| eama family transporter | BK664_13260 | Not Available | Negative | 2900543 - 2901454 | 32540.9 |
| lysr family transcriptional regulator | BK664_13265 | Not Available | Positive | 2901551 - 2902414 | 31089.8 |
| u32 family peptidase | BK664_13270 | Not Available | Negative | 2902614 - 2903939 | 49721.6 |
| ai-2e family transporter | BK664_13275 | Not Available | Positive | 2904103 - 2905164 | 38914.0 |
| hypothetical protein | BK664_13280 | Not Available | Negative | 2905161 - 2905343 | 6163.52 |
| hypothetical protein | BK664_13285 | Not Available | Negative | 2905444 - 2905638 | 7207.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
