Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-nad kinase | BK664_13040 | Not Available | Negative | 2853688 - 2854788 | 38465.3 |
| sigma-54-dependent fis family transcriptional regulator | BK664_13045 | Not Available | Positive | 2855133 - 2857028 | 70085.9 |
| hypothetical protein | BK664_13050 | Not Available | Negative | 2857241 - 2857645 | 15162.1 |
| type 1 glutamine amidotransferase domain-containing protein | BK664_13055 | Not Available | Negative | 2857936 - 2858766 | 29333.2 |
| amidase | BK664_13060 | Not Available | Negative | 2859106 - 2859855 | 27114.3 |
| mfs transporter | BK664_13065 | Not Available | Negative | 2859918 - 2861231 | 47496.2 |
| lysr family transcriptional regulator | BK664_13070 | Not Available | Positive | 2861370 - 2862305 | 34564.9 |
| arsr family transcriptional regulator | BK664_13075 | Not Available | Positive | 2862760 - 2863134 | 14264.6 |
| hypothetical protein | BK664_13080 | Not Available | Positive | 2863194 - 2863442 | 9120.17 |
| lysr family transcriptional regulator | BK664_13085 | Not Available | Negative | 2863614 - 2864552 | 34358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
