Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | BK664_12940 | Not Available | Negative | 2830403 - 2831530 | 41710.5 |
| hypothetical protein | BK664_12945 | Not Available | Negative | 2831994 - 2832230 | 8914.62 |
| mfs transporter | BK664_12950 | Not Available | Negative | 2833019 - 2834212 | 41126.8 |
| hypothetical protein | BK664_12955 | Not Available | Negative | 2834390 - 2835418 | 37615.0 |
| lysr family transcriptional regulator | BK664_12960 | Not Available | Positive | 2835610 - 2836509 | 33270.3 |
| hypothetical protein | BK664_12965 | Not Available | Positive | 2837379 - 2837609 | 8919.56 |
| malate dehydrogenase | BK664_12970 | Not Available | Positive | 2838399 - 2839643 | 44199.4 |
| hypothetical protein | BK664_12975 | Not Available | Positive | 2839962 - 2840723 | 27513.4 |
| isocitrate dehydrogenase | BK664_12980 | Not Available | Positive | 2841212 - 2842225 | 36198.7 |
| hypothetical protein | BK664_12985 | Not Available | Negative | 2842565 - 2842795 | 9013.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
